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Aziz Khan
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Recent Posts
Computational biology without borders
My worst Journal shopping and peer-review experience
Towards a format-free submission policy: Let's put science first
A database of funding for postdocs & ECRs
JASPAR database in a new look after 14 years
Time to make Venn diagrams UpSet
Posts
Welcome to my new website using Hugo framework
Recent Publications
A call to eradicate non-inclusive terms from the life sciences
COVID-19: students caught in Pakistan's digital divide
UniBind: maps of high-confidence direct TF-DNA interactions across nine species
BiasAway: command-line and web server to generate nucleotide composition-matched DNA background sequences
The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution
JASPAR 2020: update of the open-access database of transcription factor binding profiles
Modeling RNA-Binding Protein Specificity In Vivo by Precisely Registering Protein-RNA Crosslink Sites
Integrative modeling reveals key chromatin and sequence signatures predicting super-enhancers
High OGT activity is essential for MYC-driven proliferation of prostate cancer cells
A map of direct TF-DNA interactions in the human genome
Super-enhancers are transcriptionally more active and cell-type-specific than stretch enhancers
Making genome browsers portable and personal
Bioconda: sustainable and comprehensive software distribution for the life sciences
JASPAR RESTful API: accessing JASPAR data from any programming language
Put science first and formatting later
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
Intervene: a tool for intersection and visualization of multiple gene or genomic region sets
Publications
dbSUPER: a database of super-enhancers in mouse and human genome
Adaptive Watermark Strength Selection using Particle Swarm Optimization