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UniBind: maps of high-confidence direct TF-DNA interactions across nine species

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BiasAway: command-line and web server to generate nucleotide composition-matched DNA background sequences

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Evaluating features of scientific conferences: A call for improvements

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The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

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JASPAR 2020: update of the open-access database of transcription factor binding profiles

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Modeling RNA-Binding Protein Specificity In Vivo by Precisely Registering Protein-RNA Crosslink Sites

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Integrative modeling reveals key chromatin and sequence signatures predicting super-enhancers

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High OGT activity is essential for MYC-driven proliferation of prostate cancer cells

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A map of direct TF-DNA interactions in the human genome

Details PDF Code Project UniBind Portal Preprint

Super-enhancers are transcriptionally more active and cell-type-specific than stretch enhancers

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Making genome browsers portable and personal

Details PDF GIVE library

Bioconda: sustainable and comprehensive software distribution for the life sciences

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JASPAR RESTful API: accessing JASPAR data from any programming language

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Put science first and formatting later

Details PDF F1000Prime Recommendations

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

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Intervene: a tool for intersection and visualization of multiple gene or genomic region sets

Details PDF Code Project Shiny App Preprint

dbSUPER: a database of super-enhancers in mouse and human genome

Details PDF Project Database Preprint

Adaptive Watermark Strength Selection using Particle Swarm Optimization