Publications

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Evaluating features of scientific conferences: A call for improvements

Details PDF Code Conferences database

JASPAR 2020: update of the open-access database of transcription factor binding profiles

Details PDF Code Project JASPAR 2020

Modeling RNA-Binding Protein Specificity In Vivo by Precisely Registering Protein-RNA Crosslink Sites

Details PDF mCrossBase Preprint

Integrative modeling reveals key chromatin and sequence signatures predicting super-enhancers

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High OGT activity is essential for MYC-driven proliferation of prostate cancer cells

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A map of direct TF-DNA interactions in the human genome

Details PDF Code Project UniBind Portal Preprint

Super-enhancers are transcriptionally more active and cell-type-specific than stretch enhancers

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Making genome browsers portable and personal

Details PDF GIVE library

Bioconda: sustainable and comprehensive software distribution for the life sciences

Details PDF Code Docs Preprint

JASPAR RESTful API: accessing JASPAR data from any programming language

Details PDF Code Project Demo site Preprint

Put science first and formatting later

Details PDF F1000Prime Recommendations

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

Details PDF Code Project JASPAR 2018

Intervene: a tool for intersection and visualization of multiple gene or genomic region sets

Details PDF Code Project Shiny App Preprint

dbSUPER: a database of super-enhancers in mouse and human genome

Details PDF Project Database Preprint

A hybrid feature selection approach by combining miD and miQ

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Adaptive Watermark Strength Selection using Particle Swarm Optimization

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